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Abstract Peninsular India hosts the initial rain-down of the Indian Summer Monsoon (ISM) after which winds travel further east inwards into Asia. Stalagmite oxygen isotope composition from this region, such as those from Belum Cave, preserve the vital signals of the past ISM variability. These archives experience a single wet season with a single dominant moisture source annually. Here we present high-resolution δ 18 O, δ 13 C and trace element (Mg/Ca, Sr/Ca, Ba/Ca, Mn/Ca) time series from a Belum Cave stalagmite spanning glacial MIS-6 (from ~ 183 to ~ 175 kyr) and interglacial substages MIS-5c-5a (~ 104 kyr to ~ 82 kyr). With most paleomonsoon reconstructions reporting coherent evolution of northern hemisphere summer insolation and ISM variability on orbital timescale, we focus on understanding the mechanisms behind millennial scale variability. Finding that the two are decoupled over millennial timescales, we address the role of the Southern Hemisphere processes in modulating monsoon strength as a part of the Hadley circulation. We identify several strong and weak episodes of ISM intensity during 104–82 kyr. Some of the weak episodes correspond to warming in the southern hemisphere associated with weak cross-equatorial winds. We show that during the MIS-5 substages, ISM strength gradually declined with millennial scale variability linked to Southern Hemisphere temperature changes which in turn modulate the strength of the Mascarene High.